Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11574294 chr8:30969978 C/T ELP3 chr8:27947190-28048673:+ -0.85 -6.99 1.24E-11 Box Plot
BLCA rs11574294 chr8:30969978 C/T INTS10 chr8:19674651-19709594:+ -0.75 -6.61 1.29E-10 Box Plot
BLCA rs11574294 chr8:30969978 C/T KIAA1967 chr8:22462257-22477981:+ -0.76 -6.45 3.3E-10 Box Plot
BLCA rs11574294 chr8:30969978 C/T TMEM66 chr8:29920528-29939940:- -0.69 -6.56 1.79E-10 Box Plot
BLCA rs11585086 chr1:233418270 A/G CSN3 chr4:71108305-71117145:+ -0.36 -6.02 3.99E-9 Box Plot
BLCA rs11585347 chr1:245624051 A/G LY86 chr6:6588341-6655216:+ -0.36 -6.47 2.95E-10 Box Plot
BLCA rs11594351 chr10:57075825 C/G FLJ44635 chrX:71364034-71381599:+ -0.37 -6.35 6.05E-10 Box Plot
BLCA rs11594351 chr10:57075825 C/G LOC100130331 chr1:238025475-238091617:+ -0.38 -6.33 6.68E-10 Box Plot
BLCA rs11594351 chr10:57075825 C/G RPL19P12 chr7:102781796-102782386:- -0.36 -6.04 3.58E-9 Box Plot
BLCA rs11603727 chr11:77703350 T/C INTS4L1 chr7:64601603-64694600:+ 0.48 6.24 1.13E-9 Box Plot
BLCA rs11604083 chr11:63910417 G/A SBSN chr19:36014269-36019253:- -0.48 -6.01 4.4E-9 Box Plot
BLCA rs11605955 chr11:77616578 C/T INTS4L1 chr7:64601603-64694600:+ 0.49 6.72 6.8E-11 Box Plot
BLCA rs11606909 chr11:77698694 T/C INTS4L1 chr7:64601603-64694600:+ 0.48 6.45 3.46E-10 Box Plot
BLCA rs11606971 chr11:77641273 G/A INTS4L1 chr7:64601603-64694600:+ 0.49 6.68 8.27E-11 Box Plot
BLCA rs11607479 chr11:77639511 T/A INTS4L1 chr7:64601603-64694600:+ 0.5 6.89 2.37E-11 Box Plot